Search a genome sequence for secondary metabolite biosynthetic gene clusters

Notification settings

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Data input

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Sequence file (GenBank / EMBL / FASTA format)

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NCBI accession number of desired sequence

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Feature annotations (optional, GFF3 format)

Upload extra annotations

What is this?

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antiSMASH annotations sideload file (JSON).

Detection strictness: {{ ctrl.strictness_levels[ctrl.hmmdetection_strictness].id }} {{ ctrl.strictness_levels[ctrl.hmmdetection_strictness].warning }}

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Extra features

Time-consuming features (Increasing run-time from minutes to hours per chromosome)

Please be considerate in your use of fungiSMASH. Help us keep fungiSMASH available for everybody by limiting yourself to 5 concurrent jobs. Need to run more? See the antiSMASH install guide for instructions for getting your own antiSMASH/fungiSMASH installation.